The EOL Blog

News, Notices and Commentary from The Encyclopedia of Life

News: Contribute Organism Sounds to EOL via SoundCloud

We are very happy today to announce the availability of an EOL group on SoundCloud you can use to share your recordings of organism sounds with the world through the Encyclopedia of Life (EOL).

Alexander Ljung, founder and CEO of SoundCloud, had this to say about this new collaboration:

Sound plays a huge role in our understanding, identifying and differentiating of animals.  It’s inspiring to see a platform like EOL maximizing SoundCloud to provide a free and centralised source for information on all species that anyone can submit to.

To contribute a sound to EOL through SoundCloud, sign up for a free SoundCloud account, upload your sound(s) to SoundCloud, and then share to the EOL group.  

The sounds shared with the EOL group on SoundCloud will be “harvested” by EOL on a regular basis, and if they meet the requirements described below, EOL will associate the recording with the taxon page of each organism featured in the recordings.  Note that this is very similar to how EOL interacts with the (very popular) EOL group on Flickr.

Requirements:

A. Sounds should be tagged with the scientific names of all organisms identified in the recording.  Species and subspecies identifications are ideal, but if you only know the genus or family, then add these tags instead.

Specific instructions on the different tagging options can be found on the EOL group on SoundCloud.

B. Sounds contributed to EOL must be licensed under one of the following licenses:

  1. Creative Commons Attribution-NonCommercial-ShareAlike (CC-BY-NC-SA) 
  2. Creative Commons Attribution-NonCommercial (CC-BY-NC) 
  3. Creative Commons Attribution (CC-BY) 
  4. Creative Commons Attribution-ShareAlike (CC-BY-SA) 
  5. Public Domain

(Sounds marked with any of the Creative Commons No Derivatives licenses or an All Rights Reserved license will not be imported. This does not mean *all* of your sounds on SoundCloud must be licensed like this - just the ones you choose to share with EOL. Thanks for your support on this.)

Adding tags and setting the CC license is relatively simple.  It looks a bit like this.

C. If it is possible for you to identify the places in your sound where certain species can be heard, please do!  Here are instructions for how to do this.

If you have questions, let us know by leaving a comment here.  And thank you in advance for your contributions to EOL.

PS - Congratulations to Soundcloud on reaching the impressive 10 million user mark!

Biodiversity on the Move - An Article by Ari Daniel Shapiro from APM

Editor’s Note: Today’s guest author is Ari Daniel Shapiro from Atlantic Public Media (APM), a non-profit public media organization in Woods Hole, Massachusetts. APM was the recipient of a Google Earth Outreach Developer Grant, funded through the Google Inc. Charitable Giving Fund at the Tides Foundation. We’re excited to showcase how Atlantic Public Media has weaved Google Earth and KML tours into engaging stories about the diversity of life.

Life gets around. Tiny Arctic Terns soar from the Arctic to the Antarctic, and back, in a single year. A kind of sea algae known as “sea grapes” roam from Australia to the Mediterranean as stowaways, and then promptly conquer their new home.

As a radio producer, I’m used to telling these kinds of stories with audio, weaving together interview tape, ambient sound, and narration. For the last two years, I’ve worked with Atlantic Public Media and the Encyclopedia of Life (EOL) to produce an audio series entitled One Species at Time. Each episode pays homage to a different organism that gallops or creeps or pulses on our planet. We collaborate on these stories with Marie Studer, the EOL’s Learning and Education Director, who has championed our podcast as way to make the natural world come alive and generate excitement amongst people who want to learn about it and explore.

While our podcast and public radio programming brought these tales of the natural world to listeners all over the planet, we always look for ways to tell these stories better and share them more widely. Eduardo Garcia Milagros, a biologist and KML developer in Spain, approached us last year with the idea to use Google Earth as a platform for these mini-documentaries. Brimming with enthusiasm, he shared “When I first opened Google Earth, I went to see my hometown. Once I started exploring KML capabilities, I realized that Google Earth can be an amazing educational tool, especially when you have a good story.” Inspired by his excitement, we decided to identify species whose stories could really be best illustrated through a map, such as the Arctic Tern’s annual migration.

Caption: Our tour on Arctic terns can be viewed on YouTube or downloaded and explored in Google Earth.

Incorporating Google Earth into our narratives proved to be an interesting challenge for me and Jay Allison, my editor on the project and the Executive Director of APM. We wanted to make the most of the map as a medium to bring to life the tale of the Arctic Tern and other species for viewers. By integrating geographic animation and imagery from all over the world with the audio and images from contributing scientists, we were able to support and enhance the story. For example, in the sea algae tour below, we circle the globe to the Amazon rainforest to illustrate a phenomenon in the ecology of the Mediterranean.

Caption: Our sea algae tour can also be found on YouTube or downloaded for viewing in Google Earth.

These tours combine voice, sound, images, video, and data-driven animations to explain how two creatures have been able to travel so much of our planet. Coming from a public radio documentary background, we tend to approach things from a purely narrative or poetic angle, but Google Earth tours allow for audio/visual dialogue as well. The movement isn’t purely in the story. The map can become part of a “conversation,” and we’re just beginning to explore the possibilities.

We hope to produce more of these Biodiversity on the Move tours in the future; we’d like to hear what you think of them and what we can improve next time. Drop us a line here on the EOL Blog.

Posted by Ari Daniel Shapiro, Atlantic Public Media and the Encyclopedia of Life 

Press Release: The Encyclopedia of Life Announces 2012 Rubenstein Fellows

Scientists from around the world to share research expertise through EOL

Washington, D.C. – January 18, 2012The Encyclopedia of Life (EOL) is pleased to announce the 2012 class of the EOL Rubenstein Fellows. These 16 scientists will use EOL as a platform for sharing their biodiversity research with their colleagues and the general public.

EOL Rubenstein Fellows awards are made possible through a generous donation by David M. Rubenstein to the Smithsonian Institution’s National Museum of Natural History. The EOL Rubenstein Fellows program supports the work of a diverse group of scientists who are committed to online collaboration and outreach. Fellows receive partial funding for up to one year to translate biodiversity research, databases, and media into rich, online resources through the Encyclopedia of Life. More than 60 fellowships are expected to be awarded over the four years of the program, which began in 2010.

“The 2012 EOL Rubenstein Fellows come from various disciplinary, professional, and cultural backgrounds and are engaged in a broad range of cutting-edge scientific research activities,” said Dr. Erick Mata, EOL Executive Director. “This outstanding group will help deepen our understanding of biodiversity and reach new audiences around the world.”

EOL Rubenstein Fellows are selected on the basis of stellar achievement, promise for continued accomplishment, and the relevance of their work. This year’s recipients specialize in a variety of taxonomic areas, ranging from the evolutionary ecology of invasive plants to ambrosia beetles to Indo-Pacific sponges.

One of the hallmarks of the EOL Rubenstein Fellows program is the diversity of its participants. Successful candidates were chosen from 86 students, postdoctoral and mid-career scientists, and 9 of the 16 are based in countries outside of the United States, including Australia, the Czech Republic, China, and India.

For a full list of EOL Rubenstein Fellows, their specialties, and their institutional affiliations, please visit the 2012 EOL Rubenstein Fellows page on EOL.  The staff of EOL thanks its expert advisors and review committee for their support during the selection process. 

Funded by a generous gift by David M. Rubenstein to the Smithsonian Institution’s National Museum of Natural History, the EOL Rubenstein Fellows Program provides partial stipend or salary support (up to 50% in one year) for scientists to serve information about the organisms they study through the Encyclopedia of Life. Please visit the EOL Rubenstein Fellows page for more information about the program.

The Encyclopedia of Life (EOL) operates as an ongoing collaboration of individuals and organizations who share the vision to provide global access to knowledge about life on Earth. EOL is supported by founding sponsors the John D. and Catherine T. MacArthur Foundation and the Alfred P. Sloan Foundation.  Additional support comes from EOL member institutions and donations from around the world.  

Source eol.org

Valter Jacinto is the winner of the latest EOL Flickr contest on the theme “mushrooms”.  Congratulations, Valter!
Photo: Stinkhorn Fungus (Colus hirudinosus) photographed on December 11, 2010 in Algarave, Portugal

Valter Jacinto is the winner of the latest EOL Flickr contest on the theme “mushrooms”.  Congratulations, Valter!

Photo: Stinkhorn Fungus (Colus hirudinosus) photographed on December 11, 2010 in Algarave, Portugal

The January 13, 2012 release introduced the following new capabilities and fixes to EOL:
New interface languages
French
Galician
Serbian (Cyrillic script)
Serbian (Latin script)
(NOTE - Macedonian, German, Malay, and Dutch are in review pending feedback from TranslateWiki community members)
(NOTE - EOL welcomes users to become part of the EOL Translation Community on Translatewiki.net - please follow the link on the left-hand menu to join)
Enhancements
WEB-3141 - Create Alternative collection views: List view and Gallery view
WEB-3065 - Add an optional custom sort field for collections, make available via the API & the main interface
WEB-3190 - Implement the “Contact Us” form and localize it
WEB-3147 - “Reply-to” functionality for comments; “edit” functionality for comments; “delete” function for comments for admins; threading of comments
Bug fixes
WEB-3241 - Cannot upload file to EOL CMS
WEB-2358 - Unable to set preferred common names and have it handled well by interface.
WEB-2994 - Curators not listed on curated pages
WEB-2998 - When a text object is edited by the author, the previous version is also visible above the new version, even when logged out
WEB-3034 - When a curator adds a new association to a data object, this action does not get recorded in the Updates
WEB-3050 - Add/Remove associations doesn’t save the curator activity logs properly.
WEB-3115 - Exemplar image in overview is linked to old version of data object page
WEB-3120 - Newly added taxon association ends up on old version of the data object
WEB-3204 - Error with Remove curatorship function
WEB-3218 - Adding one text article results in duplicates
WEB-3221 - Code displaying that’s not supposed to when moving items between collections
WEB-3236 - Problematic search results when pages have been merged
WEB-3245 - Stylesheet for data object page should include more space between object and reference
WEB-3254 - Fix HTML tags showing in data object title section
WEB-3227 - Arabic images with translations not showing up properly in media, overview, data object page.
(Photo: Lacewing (Chrysopidae) eggs by Katja Schulz care of the EOL Group on Flickr)

The January 13, 2012 release introduced the following new capabilities and fixes to EOL:

New interface languages

  • French
  • Galician
  • Serbian (Cyrillic script)
  • Serbian (Latin script)

(NOTE - Macedonian, German, Malay, and Dutch are in review pending feedback from TranslateWiki community members)

(NOTE - EOL welcomes users to become part of the EOL Translation Community on Translatewiki.net - please follow the link on the left-hand menu to join)

Enhancements

  • WEB-3141 - Create Alternative collection views: List view and Gallery view
  • WEB-3065 - Add an optional custom sort field for collections, make available via the API & the main interface
  • WEB-3190 - Implement the “Contact Us” form and localize it
  • WEB-3147 - “Reply-to” functionality for comments; “edit” functionality for comments; “delete” function for comments for admins; threading of comments

Bug fixes

  • WEB-3241 - Cannot upload file to EOL CMS
  • WEB-2358 - Unable to set preferred common names and have it handled well by interface.
  • WEB-2994 - Curators not listed on curated pages
  • WEB-2998 - When a text object is edited by the author, the previous version is also visible above the new version, even when logged out
  • WEB-3034 - When a curator adds a new association to a data object, this action does not get recorded in the Updates
  • WEB-3050 - Add/Remove associations doesn’t save the curator activity logs properly.
  • WEB-3115 - Exemplar image in overview is linked to old version of data object page
  • WEB-3120 - Newly added taxon association ends up on old version of the data object
  • WEB-3204 - Error with Remove curatorship function
  • WEB-3218 - Adding one text article results in duplicates
  • WEB-3221 - Code displaying that’s not supposed to when moving items between collections
  • WEB-3236 - Problematic search results when pages have been merged
  • WEB-3245 - Stylesheet for data object page should include more space between object and reference
  • WEB-3254 - Fix HTML tags showing in data object title section
  • WEB-3227 - Arabic images with translations not showing up properly in media, overview, data object page.

(Photo: Lacewing (Chrysopidae) eggs by Katja Schulz care of the EOL Group on Flickr)

From the new Amphibians and Reptiles of the Philippines Collection.  Photo by Cameron Siler.
EOL Rubenstein Fellow Cameron Siler has developed detailed species accounts for the amphibians and reptiles of the Philippine islands. The regionalized biodiversity across the Philippines is unique as 79% of the amphibian species and 68% of the reptile species are endemic to the country.

From the new Amphibians and Reptiles of the Philippines Collection.  Photo by Cameron Siler.

EOL Rubenstein Fellow Cameron Siler has developed detailed species accounts for the amphibians and reptiles of the Philippine islands. The regionalized biodiversity across the Philippines is unique as 79% of the amphibian species and 68% of the reptile species are endemic to the country.

New EOL Podcast: “Sanibel Shells”

Epitonium angulatum

In this episode of One Species at a Time, we join serious beachcombers along the high-tide line of Sanibel Island, Florida, USA. These “shellers” come in search of beautiful sea shells, sometimes no bigger than a grain of rice, that are the remains of marine snails, bivalves, and other mollusks. Along the beach and at the island’s Bailey-Matthews Shell Museum, we learn why Sanibel’s shores are so rich in molluscan treasure, and how shelling has captured the imaginations of scientists and enthusiasts alike. 

Listen to the podcast

Learn more about Epitonium angulatum, a species of shell found on Sanibel.